Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTSDP07339 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSDP07339 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CTSDP07339 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.63■□□□□ 0.41
CTSDP07339 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSDP07339 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTSDP07339 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSDP07339 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.62■□□□□ 0.41
CTSDP07339 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSDP07339 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSDP07339 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTSDP07339 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSDP07339 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSDP07339 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CTSDP07339 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTSDP07339 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTSDP07339 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSDP07339 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 AC092028.1-203ENST00000608262 953 ntBASIC17.61■□□□□ 0.41
CTSDP07339 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSDP07339 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTSDP07339 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSDP07339 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSDP07339 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSDP07339 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSDP07339 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTSDP07339 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTSDP07339 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 AC068587.7-201ENST00000641602 218 ntBASIC17.6■□□□□ 0.41
CTSDP07339 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSDP07339 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSDP07339 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTSDP07339 GABARAPL3-202ENST00000624044 1851 ntBASIC17.6■□□□□ 0.41
CTSDP07339 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSDP07339 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CTSDP07339 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.59■□□□□ 0.41
CTSDP07339 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSDP07339 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.59■□□□□ 0.41
CTSDP07339 RARRES2P1-201ENST00000474487 481 ntBASIC17.59■□□□□ 0.41
CTSDP07339 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSDP07339 MTDHP2-201ENST00000601468 714 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms