Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.69■■□□□ 1.22
RB1P06400 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 AC128676.1-201ENST00000454392 318 ntBASIC22.69■■□□□ 1.22
RB1P06400 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RB1P06400 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.69■■□□□ 1.22
RB1P06400 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.68■■□□□ 1.22
RB1P06400 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 KRT16P2-201ENST00000414673 1423 ntBASIC22.68■■□□□ 1.22
RB1P06400 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 AL158047.1-201ENST00000445918 881 ntBASIC22.68■■□□□ 1.22
RB1P06400 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.68■■□□□ 1.22
RB1P06400 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.68■■□□□ 1.22
RB1P06400 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RB1P06400 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RB1P06400 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
RB1P06400 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.67■■□□□ 1.22
RB1P06400 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RB1P06400 RBM17P2-201ENST00000616397 1405 ntBASIC22.67■■□□□ 1.22
RB1P06400 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RB1P06400 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.67■■□□□ 1.22
RB1P06400 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RB1P06400 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.67■■□□□ 1.22
RB1P06400 RPS2P4-201ENST00000476944 856 ntBASIC22.67■■□□□ 1.22
RB1P06400 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.67■■□□□ 1.22
RB1P06400 AC243732.1-201ENST00000612648 864 ntBASIC22.67■■□□□ 1.22
RB1P06400 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.67■■□□□ 1.22
RB1P06400 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.67■■□□□ 1.22
RB1P06400 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RB1P06400 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.67■■□□□ 1.22
RB1P06400 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RB1P06400 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RB1P06400 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RB1P06400 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.66■■□□□ 1.22
RB1P06400 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RB1P06400 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.66■■□□□ 1.22
RB1P06400 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.66■■□□□ 1.22
RB1P06400 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
RB1P06400 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RB1P06400 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RB1P06400 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RB1P06400 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.65■■□□□ 1.22
RB1P06400 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.65■■□□□ 1.22
RB1P06400 AC026366.1-201ENST00000488803 879 ntBASIC22.65■■□□□ 1.22
RB1P06400 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.65■■□□□ 1.22
RB1P06400 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RB1P06400 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.65■■□□□ 1.22
RB1P06400 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.65■■□□□ 1.22
RB1P06400 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.65■■□□□ 1.22
RB1P06400 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RB1P06400 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RB1P06400 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RB1P06400 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RB1P06400 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RB1P06400 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RB1P06400 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.64■■□□□ 1.21
RB1P06400 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RB1P06400 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RB1P06400 AL596275.1-201ENST00000423464 877 ntBASIC22.64■■□□□ 1.21
RB1P06400 UNC93B5-201ENST00000530315 699 ntBASIC22.64■■□□□ 1.21
RB1P06400 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.64■■□□□ 1.21
RB1P06400 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.64■■□□□ 1.21
RB1P06400 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RB1P06400 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RB1P06400 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RB1P06400 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RB1P06400 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RB1P06400 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.63■■□□□ 1.21
RB1P06400 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.63■■□□□ 1.21
RB1P06400 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RB1P06400 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RB1P06400 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RB1P06400 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.63■■□□□ 1.21
RB1P06400 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms