Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HMGN1P05114 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGN1P05114 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 AC092171.4-201ENST00000609130 632 ntBASIC19.22■□□□□ 0.67
HMGN1P05114 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGN1P05114 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGN1P05114 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN1P05114 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HMGN1P05114 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGN1P05114 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGN1P05114 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HMGN1P05114 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN1P05114 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGN1P05114 AL356740.2-201ENST00000601559 647 ntBASIC19.21■□□□□ 0.67
HMGN1P05114 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGN1P05114 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN1P05114 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN1P05114 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGN1P05114 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN1P05114 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN1P05114 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
HMGN1P05114 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN1P05114 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HMGN1P05114 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 KRT16P3-201ENST00000439127 1283 ntBASIC19.2■□□□□ 0.66
HMGN1P05114 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGN1P05114 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN1P05114 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN1P05114 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN1P05114 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HMGN1P05114 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN1P05114 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN1P05114 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HMGN1P05114 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGN1P05114 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HMGN1P05114 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGN1P05114 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
HMGN1P05114 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGN1P05114 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN1P05114 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGN1P05114 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGN1P05114 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN1P05114 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 AC073130.3-201ENST00000624389 2278 ntBASIC19.17■□□□□ 0.66
HMGN1P05114 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HMGN1P05114 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HMGN1P05114 AL049796.1-201ENST00000565336 1766 ntBASIC19.16■□□□□ 0.66
HMGN1P05114 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGN1P05114 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGN1P05114 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms