Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
TOMM40O96008 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 SERBP1P1-201ENST00000396021 1160 ntBASIC16.61■□□□□ 0.25
TOMM40O96008 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
TOMM40O96008 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TOMM40O96008 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TOMM40O96008 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TOMM40O96008 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 AC136469.2-201ENST00000623944 1028 ntBASIC16.6■□□□□ 0.25
TOMM40O96008 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.6■□□□□ 0.25
TOMM40O96008 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TOMM40O96008 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TOMM40O96008 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
TOMM40O96008 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TOMM40O96008 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.59■□□□□ 0.25
TOMM40O96008 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TOMM40O96008 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
TOMM40O96008 AC026471.6-201ENST00000622954 1905 ntBASIC16.59■□□□□ 0.25
TOMM40O96008 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.59■□□□□ 0.25
TOMM40O96008 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.59■□□□□ 0.25
TOMM40O96008 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TOMM40O96008 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.59■□□□□ 0.25
TOMM40O96008 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.59■□□□□ 0.25
TOMM40O96008 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 AC011298.3-201ENST00000615796 283 ntBASIC16.59■□□□□ 0.25
TOMM40O96008 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.59■□□□□ 0.25
TOMM40O96008 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.59■□□□□ 0.25
TOMM40O96008 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.59■□□□□ 0.25
TOMM40O96008 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TOMM40O96008 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOMM40O96008 AC005229.4-201ENST00000610085 2198 ntBASIC16.58■□□□□ 0.25
TOMM40O96008 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TOMM40O96008 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.58■□□□□ 0.25
TOMM40O96008 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
TOMM40O96008 AP005435.1-201ENST00000529293 1178 ntBASIC16.58■□□□□ 0.24
TOMM40O96008 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.58■□□□□ 0.24
TOMM40O96008 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.58■□□□□ 0.24
TOMM40O96008 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TOMM40O96008 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.58■□□□□ 0.24
TOMM40O96008 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.58■□□□□ 0.24
TOMM40O96008 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.58■□□□□ 0.24
TOMM40O96008 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TOMM40O96008 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TOMM40O96008 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TOMM40O96008 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TOMM40O96008 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.57■□□□□ 0.24
TOMM40O96008 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TOMM40O96008 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.57■□□□□ 0.24
TOMM40O96008 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.57■□□□□ 0.24
TOMM40O96008 MIR4466-201ENST00000606121 54 ntBASIC16.57■□□□□ 0.24
TOMM40O96008 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.57■□□□□ 0.24
TOMM40O96008 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TOMM40O96008 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOMM40O96008 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TOMM40O96008 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.56■□□□□ 0.24
TOMM40O96008 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOMM40O96008 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms