Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.97■■□□□ 1.43
GGPS1O95749 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.97■■□□□ 1.43
GGPS1O95749 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.97■■□□□ 1.43
GGPS1O95749 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.97■■□□□ 1.43
GGPS1O95749 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.97■■□□□ 1.43
GGPS1O95749 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.96■■□□□ 1.43
GGPS1O95749 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.96■■□□□ 1.43
GGPS1O95749 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.96■■□□□ 1.43
GGPS1O95749 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.96■■□□□ 1.43
GGPS1O95749 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.96■■□□□ 1.43
GGPS1O95749 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
GGPS1O95749 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GGPS1O95749 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
GGPS1O95749 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
GGPS1O95749 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
GGPS1O95749 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
GGPS1O95749 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
GGPS1O95749 GPX1P1-201ENST00000388829 606 ntBASIC23.95■■□□□ 1.42
GGPS1O95749 AL355802.2-201ENST00000402069 882 ntBASIC23.95■■□□□ 1.42
GGPS1O95749 AC005181.1-201ENST00000604782 1256 ntBASIC23.95■■□□□ 1.42
GGPS1O95749 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
GGPS1O95749 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
GGPS1O95749 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
GGPS1O95749 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
GGPS1O95749 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.94■■□□□ 1.42
GGPS1O95749 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
GGPS1O95749 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.94■■□□□ 1.42
GGPS1O95749 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.94■■□□□ 1.42
GGPS1O95749 AC010536.3-201ENST00000620306 533 ntBASIC23.94■■□□□ 1.42
GGPS1O95749 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
GGPS1O95749 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GGPS1O95749 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
GGPS1O95749 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
GGPS1O95749 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 SLC7A5P2-201ENST00000553010 536 ntBASIC23.93■■□□□ 1.42
GGPS1O95749 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.93■■□□□ 1.42
GGPS1O95749 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.93■■□□□ 1.42
GGPS1O95749 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
GGPS1O95749 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GGPS1O95749 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.93■■□□□ 1.42
GGPS1O95749 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.92■■□□□ 1.42
GGPS1O95749 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
GGPS1O95749 C9orf163-202ENST00000624034 2573 ntBASIC23.92■■□□□ 1.42
GGPS1O95749 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.92■■□□□ 1.42
GGPS1O95749 CNN2P6-201ENST00000439038 900 ntBASIC23.92■■□□□ 1.42
GGPS1O95749 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.92■■□□□ 1.42
GGPS1O95749 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.92■■□□□ 1.42
GGPS1O95749 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
GGPS1O95749 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
GGPS1O95749 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GGPS1O95749 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.92■■□□□ 1.42
GGPS1O95749 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
GGPS1O95749 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
GGPS1O95749 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.91■■□□□ 1.42
GGPS1O95749 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.91■■□□□ 1.42
GGPS1O95749 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.91■■□□□ 1.42
GGPS1O95749 AL121832.2-201ENST00000610979 668 ntBASIC23.91■■□□□ 1.42
GGPS1O95749 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
GGPS1O95749 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 C1orf229-201ENST00000623686 2258 ntBASIC23.91■■□□□ 1.42
GGPS1O95749 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
GGPS1O95749 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.91■■□□□ 1.42
GGPS1O95749 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
GGPS1O95749 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
GGPS1O95749 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
GGPS1O95749 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms