Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMC2O95347 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.97■■□□□ 1.43
SMC2O95347 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.96■■□□□ 1.43
SMC2O95347 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.96■■□□□ 1.43
SMC2O95347 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SMC2O95347 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.96■■□□□ 1.43
SMC2O95347 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 AP005435.1-201ENST00000529293 1178 ntBASIC23.96■■□□□ 1.43
SMC2O95347 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.96■■□□□ 1.43
SMC2O95347 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SMC2O95347 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SMC2O95347 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SMC2O95347 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMC2O95347 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SMC2O95347 AF106564.1-201ENST00000607058 2553 ntBASIC23.96■■□□□ 1.43
SMC2O95347 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.95■■□□□ 1.42
SMC2O95347 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.95■■□□□ 1.42
SMC2O95347 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
SMC2O95347 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.95■■□□□ 1.42
SMC2O95347 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.95■■□□□ 1.42
SMC2O95347 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMC2O95347 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC2O95347 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.94■■□□□ 1.42
SMC2O95347 AC073130.3-201ENST00000624389 2278 ntBASIC23.94■■□□□ 1.42
SMC2O95347 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC2O95347 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC2O95347 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.94■■□□□ 1.42
SMC2O95347 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.94■■□□□ 1.42
SMC2O95347 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.94■■□□□ 1.42
SMC2O95347 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SMC2O95347 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.94■■□□□ 1.42
SMC2O95347 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SMC2O95347 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SMC2O95347 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.93■■□□□ 1.42
SMC2O95347 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.93■■□□□ 1.42
SMC2O95347 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.93■■□□□ 1.42
SMC2O95347 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.93■■□□□ 1.42
SMC2O95347 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SMC2O95347 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC2O95347 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SMC2O95347 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
SMC2O95347 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 SLC47A1P1-202ENST00000449666 945 ntBASIC23.92■■□□□ 1.42
SMC2O95347 AC131281.2-201ENST00000520478 145 ntBASIC23.92■■□□□ 1.42
SMC2O95347 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SMC2O95347 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC2O95347 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.92■■□□□ 1.42
SMC2O95347 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SMC2O95347 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.91■■□□□ 1.42
SMC2O95347 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SMC2O95347 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC2O95347 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC2O95347 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SMC2O95347 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC2O95347 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMC2O95347 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
SMC2O95347 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
SMC2O95347 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMC2O95347 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
SMC2O95347 FEM1AP4-201ENST00000443167 1987 ntBASIC23.91■■□□□ 1.42
SMC2O95347 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.91■■□□□ 1.42
SMC2O95347 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC2O95347 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC2O95347 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC2O95347 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC2O95347 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC2O95347 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.9■■□□□ 1.42
SMC2O95347 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC2O95347 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SMC2O95347 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC2O95347 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SMC2O95347 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms