Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-2O95096 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-2O95096 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 Z98882.1-201ENST00000622160 2253 ntBASIC19.68■□□□□ 0.74
NKX2-2O95096 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.68■□□□□ 0.74
NKX2-2O95096 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-2O95096 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.68■□□□□ 0.74
NKX2-2O95096 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.68■□□□□ 0.74
NKX2-2O95096 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NKX2-2O95096 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NKX2-2O95096 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-2O95096 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-2O95096 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-2O95096 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.67■□□□□ 0.74
NKX2-2O95096 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-2O95096 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.67■□□□□ 0.74
NKX2-2O95096 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.67■□□□□ 0.74
NKX2-2O95096 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NKX2-2O95096 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-2O95096 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-2O95096 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-2O95096 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKX2-2O95096 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-2O95096 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
NKX2-2O95096 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.66■□□□□ 0.74
NKX2-2O95096 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.66■□□□□ 0.74
NKX2-2O95096 AC007375.3-201ENST00000600936 2314 ntBASIC19.65■□□□□ 0.74
NKX2-2O95096 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-2O95096 AC026310.3-201ENST00000625186 2373 ntBASIC19.65■□□□□ 0.74
NKX2-2O95096 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-2O95096 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX2-2O95096 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-2O95096 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-2O95096 ZNRF2P3-201ENST00000424200 374 ntBASIC19.65■□□□□ 0.74
NKX2-2O95096 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.65■□□□□ 0.74
NKX2-2O95096 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.65■□□□□ 0.74
NKX2-2O95096 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-2O95096 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-2O95096 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NKX2-2O95096 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
NKX2-2O95096 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-2O95096 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKX2-2O95096 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.74
NKX2-2O95096 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NKX2-2O95096 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NKX2-2O95096 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.64■□□□□ 0.73
NKX2-2O95096 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NKX2-2O95096 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
NKX2-2O95096 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX2-2O95096 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.64■□□□□ 0.73
NKX2-2O95096 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NKX2-2O95096 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKX2-2O95096 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NKX2-2O95096 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKX2-2O95096 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms