Protein–RNA interactions for Protein: O60671

RAD1, Cell cycle checkpoint protein RAD1, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1O60671 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.17■□□□□ 0.82
RAD1O60671 AC133041.1-202ENST00000642053 222 ntBASIC20.17■□□□□ 0.82
RAD1O60671 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD1O60671 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAD1O60671 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RAD1O60671 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.16■□□□□ 0.82
RAD1O60671 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.16■□□□□ 0.82
RAD1O60671 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAD1O60671 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD1O60671 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.15■□□□□ 0.82
RAD1O60671 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.15■□□□□ 0.82
RAD1O60671 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.15■□□□□ 0.82
RAD1O60671 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.15■□□□□ 0.82
RAD1O60671 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.15■□□□□ 0.82
RAD1O60671 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.15■□□□□ 0.82
RAD1O60671 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.15■□□□□ 0.82
RAD1O60671 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.15■□□□□ 0.82
RAD1O60671 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD1O60671 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RAD1O60671 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RAD1O60671 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD1O60671 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
RAD1O60671 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD1O60671 AC013268.1-206ENST00000638368 961 ntBASIC20.14■□□□□ 0.81
RAD1O60671 AC112229.1-201ENST00000639295 961 ntBASIC20.14■□□□□ 0.81
RAD1O60671 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RAD1O60671 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD1O60671 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAD1O60671 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.14■□□□□ 0.81
RAD1O60671 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 TERF1P5-201ENST00000477545 1207 ntBASIC20.13■□□□□ 0.81
RAD1O60671 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.13■□□□□ 0.81
RAD1O60671 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.13■□□□□ 0.81
RAD1O60671 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.13■□□□□ 0.81
RAD1O60671 SLC7A5P1-201ENST00000568957 537 ntBASIC20.13■□□□□ 0.81
RAD1O60671 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.13■□□□□ 0.81
RAD1O60671 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.13■□□□□ 0.81
RAD1O60671 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD1O60671 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.12■□□□□ 0.81
RAD1O60671 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAD1O60671 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RAD1O60671 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RAD1O60671 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAD1O60671 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RAD1O60671 EEF1DP3-203ENST00000566025 782 ntBASIC20.12■□□□□ 0.81
RAD1O60671 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.12■□□□□ 0.81
RAD1O60671 MIR4651-201ENST00000582622 73 ntBASIC20.12■□□□□ 0.81
RAD1O60671 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.12■□□□□ 0.81
RAD1O60671 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAD1O60671 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RAD1O60671 LINC00526-201ENST00000581067 1875 ntBASIC20.11■□□□□ 0.81
RAD1O60671 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RAD1O60671 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAD1O60671 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAD1O60671 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAD1O60671 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms