Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NPHS1O60500 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.74■□□□□ 0.91
NPHS1O60500 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NPHS1O60500 AL138724.1-201ENST00000606771 1088 ntBASIC20.74■□□□□ 0.91
NPHS1O60500 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
NPHS1O60500 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
NPHS1O60500 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NPHS1O60500 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.73■□□□□ 0.91
NPHS1O60500 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.73■□□□□ 0.91
NPHS1O60500 AP005435.1-201ENST00000529293 1178 ntBASIC20.73■□□□□ 0.91
NPHS1O60500 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPHS1O60500 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPHS1O60500 GUSBP5-201ENST00000418136 578 ntBASIC20.72■□□□□ 0.91
NPHS1O60500 AL035685.1-201ENST00000636663 812 ntBASIC20.72■□□□□ 0.91
NPHS1O60500 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.72■□□□□ 0.91
NPHS1O60500 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPHS1O60500 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPHS1O60500 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPHS1O60500 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPHS1O60500 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPHS1O60500 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.71■□□□□ 0.91
NPHS1O60500 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NPHS1O60500 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NPHS1O60500 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.71■□□□□ 0.91
NPHS1O60500 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.71■□□□□ 0.91
NPHS1O60500 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NPHS1O60500 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NPHS1O60500 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPHS1O60500 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NPHS1O60500 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.71■□□□□ 0.91
NPHS1O60500 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NPHS1O60500 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPHS1O60500 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPHS1O60500 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPHS1O60500 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.7■□□□□ 0.9
NPHS1O60500 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.7■□□□□ 0.9
NPHS1O60500 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPHS1O60500 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.7■□□□□ 0.9
NPHS1O60500 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.7■□□□□ 0.9
NPHS1O60500 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPHS1O60500 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.7■□□□□ 0.9
NPHS1O60500 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NPHS1O60500 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 SERBP1P1-201ENST00000396021 1160 ntBASIC20.69■□□□□ 0.9
NPHS1O60500 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NPHS1O60500 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.69■□□□□ 0.9
NPHS1O60500 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.69■□□□□ 0.9
NPHS1O60500 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPHS1O60500 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPHS1O60500 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.68■□□□□ 0.9
NPHS1O60500 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPHS1O60500 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
NPHS1O60500 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
NPHS1O60500 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.68■□□□□ 0.9
NPHS1O60500 DUX4L19-201ENST00000557448 1267 ntBASIC20.68■□□□□ 0.9
NPHS1O60500 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.68■□□□□ 0.9
NPHS1O60500 AC136469.2-201ENST00000623944 1028 ntBASIC20.68■□□□□ 0.9
NPHS1O60500 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPHS1O60500 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.68■□□□□ 0.9
NPHS1O60500 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPHS1O60500 AP006587.3-201ENST00000525742 1516 ntBASIC20.68■□□□□ 0.9
NPHS1O60500 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPHS1O60500 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
NPHS1O60500 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPHS1O60500 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPHS1O60500 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.67■□□□□ 0.9
NPHS1O60500 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPHS1O60500 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.67■□□□□ 0.9
NPHS1O60500 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms