Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA12O60330 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGA12O60330 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 AC073210.2-201ENST00000430369 194 ntBASIC21.08■□□□□ 0.97
PCDHGA12O60330 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 LINC00565-201ENST00000562710 2331 ntBASIC21.08■□□□□ 0.97
PCDHGA12O60330 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA12O60330 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA12O60330 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA12O60330 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
PCDHGA12O60330 AC055733.4-201ENST00000638462 1354 ntBASIC21.08■□□□□ 0.96
PCDHGA12O60330 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA12O60330 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA12O60330 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PCDHGA12O60330 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDHGA12O60330 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 AC069152.1-201ENST00000438030 544 ntBASIC21.07■□□□□ 0.96
PCDHGA12O60330 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
PCDHGA12O60330 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 AC133552.2-202ENST00000575694 574 ntBASIC21.07■□□□□ 0.96
PCDHGA12O60330 AC066615.1-201ENST00000640911 628 ntBASIC21.07■□□□□ 0.96
PCDHGA12O60330 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA12O60330 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA12O60330 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA12O60330 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGA12O60330 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA12O60330 CNN2P6-201ENST00000439038 900 ntBASIC21.06■□□□□ 0.96
PCDHGA12O60330 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA12O60330 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA12O60330 AF201337.1-201ENST00000520239 748 ntBASIC21.06■□□□□ 0.96
PCDHGA12O60330 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA12O60330 AC133041.1-202ENST00000642053 222 ntBASIC21.06■□□□□ 0.96
PCDHGA12O60330 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA12O60330 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA12O60330 ANOS2P-203ENST00000472227 1816 ntBASIC21.06■□□□□ 0.96
PCDHGA12O60330 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA12O60330 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA12O60330 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA12O60330 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA12O60330 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 AC010141.2-201ENST00000452426 721 ntBASIC21.04■□□□□ 0.96
PCDHGA12O60330 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHGA12O60330 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA12O60330 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA12O60330 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA12O60330 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA12O60330 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHGA12O60330 AC138907.5-202ENST00000569484 235 ntBASIC21.03■□□□□ 0.96
PCDHGA12O60330 AC010536.3-201ENST00000620306 533 ntBASIC21.03■□□□□ 0.96
PCDHGA12O60330 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA12O60330 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGA12O60330 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGA12O60330 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA12O60330 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA12O60330 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA12O60330 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
PCDHGA12O60330 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGA12O60330 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGA12O60330 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms