Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX5O60225 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX5O60225 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSX5O60225 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 AC012354.3-201ENST00000623734 483 ntBASIC18.16■□□□□ 0.5
SSX5O60225 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX5O60225 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSX5O60225 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX5O60225 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX5O60225 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SSX5O60225 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX5O60225 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX5O60225 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX5O60225 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX5O60225 LINC01521-201ENST00000504184 1943 ntBASIC18.15■□□□□ 0.5
SSX5O60225 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX5O60225 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SSX5O60225 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX5O60225 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
SSX5O60225 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX5O60225 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX5O60225 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.14■□□□□ 0.5
SSX5O60225 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.14■□□□□ 0.49
SSX5O60225 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SSX5O60225 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SSX5O60225 BX664725.1-201ENST00000438252 379 ntBASIC18.14■□□□□ 0.49
SSX5O60225 AL031602.1-201ENST00000633169 911 ntBASIC18.14■□□□□ 0.49
SSX5O60225 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.14■□□□□ 0.49
SSX5O60225 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SSX5O60225 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSX5O60225 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SSX5O60225 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX5O60225 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SSX5O60225 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSX5O60225 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSX5O60225 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX5O60225 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX5O60225 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.13■□□□□ 0.49
SSX5O60225 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX5O60225 AC079089.2-201ENST00000531211 1277 ntBASIC18.13■□□□□ 0.49
SSX5O60225 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.13■□□□□ 0.49
SSX5O60225 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX5O60225 AC092028.1-203ENST00000608262 953 ntBASIC18.13■□□□□ 0.49
SSX5O60225 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX5O60225 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SSX5O60225 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSX5O60225 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SSX5O60225 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.13■□□□□ 0.49
SSX5O60225 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSX5O60225 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX5O60225 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SSX5O60225 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SSX5O60225 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX5O60225 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.12■□□□□ 0.49
SSX5O60225 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX5O60225 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SSX5O60225 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.12■□□□□ 0.49
SSX5O60225 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSX5O60225 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX5O60225 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX5O60225 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX5O60225 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSX5O60225 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms