Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 AC009086.3-201ENST00000623486 1008 ntBASIC20.6■□□□□ 0.89
PEX1O43933 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
PEX1O43933 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PEX1O43933 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PEX1O43933 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PEX1O43933 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.59■□□□□ 0.89
PEX1O43933 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PEX1O43933 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PEX1O43933 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.59■□□□□ 0.89
PEX1O43933 AC006455.2-201ENST00000429931 906 ntBASIC20.59■□□□□ 0.89
PEX1O43933 AC011298.3-201ENST00000615796 283 ntBASIC20.59■□□□□ 0.89
PEX1O43933 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.59■□□□□ 0.89
PEX1O43933 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PEX1O43933 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.59■□□□□ 0.89
PEX1O43933 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.59■□□□□ 0.89
PEX1O43933 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PEX1O43933 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.58■□□□□ 0.89
PEX1O43933 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PEX1O43933 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PEX1O43933 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.58■□□□□ 0.89
PEX1O43933 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.58■□□□□ 0.89
PEX1O43933 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.58■□□□□ 0.89
PEX1O43933 AF213884.3-201ENST00000563833 479 ntBASIC20.58■□□□□ 0.89
PEX1O43933 AL136967.2-201ENST00000623968 743 ntBASIC20.58■□□□□ 0.89
PEX1O43933 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PEX1O43933 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.58■□□□□ 0.88
PEX1O43933 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PEX1O43933 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX1O43933 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX1O43933 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX1O43933 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX1O43933 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.57■□□□□ 0.88
PEX1O43933 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.57■□□□□ 0.88
PEX1O43933 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
PEX1O43933 FEM1AP4-201ENST00000443167 1987 ntBASIC20.57■□□□□ 0.88
PEX1O43933 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.57■□□□□ 0.88
PEX1O43933 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PEX1O43933 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.57■□□□□ 0.88
PEX1O43933 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PEX1O43933 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PEX1O43933 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.56■□□□□ 0.88
PEX1O43933 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.56■□□□□ 0.88
PEX1O43933 ZNRF2P3-201ENST00000424200 374 ntBASIC20.56■□□□□ 0.88
PEX1O43933 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.56■□□□□ 0.88
PEX1O43933 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PEX1O43933 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PEX1O43933 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PEX1O43933 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.55■□□□□ 0.88
PEX1O43933 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PEX1O43933 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PEX1O43933 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX1O43933 Z98882.1-201ENST00000622160 2253 ntBASIC20.55■□□□□ 0.88
PEX1O43933 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PEX1O43933 MIR939-201ENST00000401314 82 ntBASIC20.55■□□□□ 0.88
PEX1O43933 AP001330.3-201ENST00000520123 633 ntBASIC20.55■□□□□ 0.88
PEX1O43933 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PEX1O43933 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.55■□□□□ 0.88
PEX1O43933 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PEX1O43933 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
PEX1O43933 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.55■□□□□ 0.88
PEX1O43933 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PEX1O43933 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.54■□□□□ 0.88
PEX1O43933 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PEX1O43933 MIR3181-201ENST00000578512 73 ntBASIC20.54■□□□□ 0.88
PEX1O43933 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.54■□□□□ 0.88
PEX1O43933 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.54■□□□□ 0.88
PEX1O43933 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PEX1O43933 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PEX1O43933 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
PEX1O43933 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms