Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 ZNRF2P3-201ENST00000424200 374 ntBASIC18.98■□□□□ 0.63
TRAF3IP2O43734 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 AC104564.3-201ENST00000582367 638 ntBASIC18.98■□□□□ 0.63
TRAF3IP2O43734 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP2O43734 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP2O43734 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 AC027612.3-201ENST00000413684 1047 ntBASIC18.96■□□□□ 0.63
TRAF3IP2O43734 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP2O43734 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP2O43734 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP2O43734 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP2O43734 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP2O43734 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF3IP2O43734 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms