Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXS1O43638 AC010542.4-201ENST00000563151 1910 ntBASIC20.12■□□□□ 0.81
FOXS1O43638 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXS1O43638 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXS1O43638 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXS1O43638 EP400NL-214ENST00000641289 2402 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 AC006015.1-201ENST00000429970 570 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 AC137761.2-201ENST00000561729 223 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 AC145350.3-201ENST00000569033 163 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 AC138907.5-202ENST00000569484 235 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXS1O43638 AL137784.2-201ENST00000607332 1000 ntBASIC20.11■□□□□ 0.81
FOXS1O43638 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FOXS1O43638 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXS1O43638 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.1■□□□□ 0.81
FOXS1O43638 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FOXS1O43638 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXS1O43638 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 AP001160.3-201ENST00000601484 763 ntBASIC20.1■□□□□ 0.81
FOXS1O43638 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXS1O43638 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXS1O43638 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXS1O43638 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
FOXS1O43638 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXS1O43638 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXS1O43638 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXS1O43638 AC004911.1-201ENST00000416316 871 ntBASIC20.08■□□□□ 0.81
FOXS1O43638 AC010141.2-201ENST00000452426 721 ntBASIC20.08■□□□□ 0.81
FOXS1O43638 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXS1O43638 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXS1O43638 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXS1O43638 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXS1O43638 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
FOXS1O43638 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXS1O43638 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXS1O43638 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.08■□□□□ 0.8
FOXS1O43638 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
FOXS1O43638 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
FOXS1O43638 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXS1O43638 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXS1O43638 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 AC016769.1-201ENST00000409132 1010 ntBASIC20.07■□□□□ 0.8
FOXS1O43638 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXS1O43638 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXS1O43638 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXS1O43638 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXS1O43638 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXS1O43638 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXS1O43638 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXS1O43638 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXS1O43638 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXS1O43638 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXS1O43638 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FOXS1O43638 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXS1O43638 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXS1O43638 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXS1O43638 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXS1O43638 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXS1O43638 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXS1O43638 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXS1O43638 C11orf96-202ENST00000528572 1834 ntBASIC20.06■□□□□ 0.8
FOXS1O43638 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXS1O43638 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXS1O43638 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXS1O43638 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXS1O43638 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
FOXS1O43638 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXS1O43638 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXS1O43638 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXS1O43638 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms