Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFSF11O14788 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF11O14788 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 C11orf96-202ENST00000528572 1834 ntBASIC19.13■□□□□ 0.65
TNFSF11O14788 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFSF11O14788 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
TNFSF11O14788 AP004607.4-201ENST00000530158 1459 ntBASIC19.12■□□□□ 0.65
TNFSF11O14788 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.12■□□□□ 0.65
TNFSF11O14788 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFSF11O14788 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFSF11O14788 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.12■□□□□ 0.65
TNFSF11O14788 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFSF11O14788 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFSF11O14788 AC003102.1-202ENST00000563394 1796 ntBASIC19.11■□□□□ 0.65
TNFSF11O14788 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFSF11O14788 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF11O14788 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.11■□□□□ 0.65
TNFSF11O14788 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFSF11O14788 KRT18P61-201ENST00000585825 1298 ntBASIC19.11■□□□□ 0.65
TNFSF11O14788 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFSF11O14788 AC010542.4-201ENST00000563151 1910 ntBASIC19.11■□□□□ 0.65
TNFSF11O14788 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFSF11O14788 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFSF11O14788 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TNFSF11O14788 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TNFSF11O14788 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.1■□□□□ 0.65
TNFSF11O14788 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TNFSF11O14788 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFSF11O14788 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFSF11O14788 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFSF11O14788 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFSF11O14788 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.09■□□□□ 0.65
TNFSF11O14788 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFSF11O14788 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
TNFSF11O14788 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF11O14788 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF11O14788 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF11O14788 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFSF11O14788 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.08■□□□□ 0.65
TNFSF11O14788 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
TNFSF11O14788 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TNFSF11O14788 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF11O14788 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF11O14788 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF11O14788 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.08■□□□□ 0.64
TNFSF11O14788 AC104564.3-201ENST00000582367 638 ntBASIC19.08■□□□□ 0.64
TNFSF11O14788 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.08■□□□□ 0.64
TNFSF11O14788 AC104187.1-201ENST00000607510 612 ntBASIC19.08■□□□□ 0.64
TNFSF11O14788 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF11O14788 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF11O14788 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF11O14788 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFSF11O14788 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TNFSF11O14788 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TNFSF11O14788 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFSF11O14788 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TNFSF11O14788 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFSF11O14788 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 358.4 ms