Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL358852.1-201ENST00000623174 1268 ntBASIC20.3■□□□□ 0.84
RTCAO00442 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.3■□□□□ 0.84
RTCAO00442 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.3■□□□□ 0.84
RTCAO00442 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.3■□□□□ 0.84
RTCAO00442 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTCAO00442 AC005224.4-201ENST00000583262 1652 ntBASIC20.29■□□□□ 0.84
RTCAO00442 AC009237.3-201ENST00000393279 1427 ntBASIC20.29■□□□□ 0.84
RTCAO00442 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.29■□□□□ 0.84
RTCAO00442 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTCAO00442 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RTCAO00442 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.29■□□□□ 0.84
RTCAO00442 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTCAO00442 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
RTCAO00442 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.28■□□□□ 0.84
RTCAO00442 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RTCAO00442 AC244015.2-201ENST00000616358 1861 ntBASIC20.28■□□□□ 0.84
RTCAO00442 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
RTCAO00442 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTCAO00442 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RTCAO00442 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTCAO00442 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.27■□□□□ 0.84
RTCAO00442 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTCAO00442 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 AC055733.4-201ENST00000638462 1354 ntBASIC20.27■□□□□ 0.84
RTCAO00442 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.27■□□□□ 0.84
RTCAO00442 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.27■□□□□ 0.84
RTCAO00442 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.27■□□□□ 0.84
RTCAO00442 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTCAO00442 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RTCAO00442 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RTCAO00442 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RTCAO00442 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTCAO00442 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTCAO00442 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.26■□□□□ 0.83
RTCAO00442 TPRG1LP1-201ENST00000598702 760 ntBASIC20.26■□□□□ 0.83
RTCAO00442 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTCAO00442 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTCAO00442 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.25■□□□□ 0.83
RTCAO00442 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTCAO00442 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTCAO00442 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RTCAO00442 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 AC104564.3-201ENST00000582367 638 ntBASIC20.25■□□□□ 0.83
RTCAO00442 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.25■□□□□ 0.83
RTCAO00442 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTCAO00442 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.24■□□□□ 0.83
RTCAO00442 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.24■□□□□ 0.83
RTCAO00442 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
RTCAO00442 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.24■□□□□ 0.83
RTCAO00442 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.24■□□□□ 0.83
RTCAO00442 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.24■□□□□ 0.83
RTCAO00442 AC026310.3-201ENST00000625186 2373 ntBASIC20.24■□□□□ 0.83
RTCAO00442 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RTCAO00442 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTCAO00442 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RTCAO00442 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.23■□□□□ 0.83
RTCAO00442 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
RTCAO00442 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.23■□□□□ 0.83
RTCAO00442 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms