Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF223E7ERA6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF223E7ERA6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF223E7ERA6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF223E7ERA6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF223E7ERA6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF223E7ERA6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 AP006587.3-201ENST00000525742 1516 ntBASIC17.69■□□□□ 0.42
RNF223E7ERA6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 AL158047.1-201ENST00000445918 881 ntBASIC17.69■□□□□ 0.42
RNF223E7ERA6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF223E7ERA6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF223E7ERA6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF223E7ERA6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF223E7ERA6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF223E7ERA6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF223E7ERA6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF223E7ERA6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF223E7ERA6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF223E7ERA6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF223E7ERA6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF223E7ERA6 LINC00526-201ENST00000581067 1875 ntBASIC17.68■□□□□ 0.42
RNF223E7ERA6 AC008175.2-201ENST00000612840 297 ntBASIC17.68■□□□□ 0.42
RNF223E7ERA6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 GCSHP5-201ENST00000443090 522 ntBASIC17.67■□□□□ 0.42
RNF223E7ERA6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 AC006058.3-201ENST00000606217 1069 ntBASIC17.67■□□□□ 0.42
RNF223E7ERA6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF223E7ERA6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF223E7ERA6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF223E7ERA6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF223E7ERA6 MYC-209ENST00000641252 345 ntBASIC17.66■□□□□ 0.42
RNF223E7ERA6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF223E7ERA6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 AC092068.2-201ENST00000590491 1708 ntBASIC17.65■□□□□ 0.42
RNF223E7ERA6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 AC142381.4-202ENST00000563973 229 ntBASIC17.65■□□□□ 0.42
RNF223E7ERA6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF223E7ERA6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF223E7ERA6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms