Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 AC142381.2-201ENST00000566120 298 ntBASIC18.89■□□□□ 0.61
NPIPB4C9JG80 AL358852.1-201ENST00000623174 1268 ntBASIC18.89■□□□□ 0.61
NPIPB4C9JG80 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NPIPB4C9JG80 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 FEM1AP4-201ENST00000443167 1987 ntBASIC18.88■□□□□ 0.61
NPIPB4C9JG80 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NPIPB4C9JG80 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.87■□□□□ 0.61
NPIPB4C9JG80 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.86■□□□□ 0.61
NPIPB4C9JG80 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 TPRG1LP1-201ENST00000598702 760 ntBASIC18.85■□□□□ 0.61
NPIPB4C9JG80 AC005837.3-201ENST00000612163 286 ntBASIC18.85■□□□□ 0.61
NPIPB4C9JG80 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPB4C9JG80 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPB4C9JG80 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms