Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.51■■□□□ 1.03
UPK3BL1B0FP48 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.51■■□□□ 1.03
UPK3BL1B0FP48 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.51■■□□□ 1.03
UPK3BL1B0FP48 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
UPK3BL1B0FP48 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 AP006587.3-201ENST00000525742 1516 ntBASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 TSPY20P-201ENST00000450910 630 ntBASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.5■■□□□ 1.03
UPK3BL1B0FP48 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 AL121832.2-201ENST00000610979 668 ntBASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 KRT87P-202ENST00000534226 1464 ntBASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 AC012676.1-201ENST00000574705 1949 ntBASIC21.49■■□□□ 1.03
UPK3BL1B0FP48 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 KRT18P6-201ENST00000555540 1265 ntBASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPK3BL1B0FP48 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPK3BL1B0FP48 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 AC092053.2-201ENST00000640557 1818 ntBASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPK3BL1B0FP48 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
UPK3BL1B0FP48 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.45■■□□□ 1.03
UPK3BL1B0FP48 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
UPK3BL1B0FP48 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 TSPY6P-201ENST00000448518 926 ntBASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 AC233723.2-201ENST00000623798 2106 ntBASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPK3BL1B0FP48 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms