Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TSPY7P-201ENST00000431358 1114 ntBASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 KRT18P35-201ENST00000510488 1269 ntBASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 AC097493.4-201ENST00000641197 219 ntBASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM88BA6NKF7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 AC233702.5-201ENST00000584107 538 ntBASIC25.14■■□□□ 1.62
TMEM88BA6NKF7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.61
TMEM88BA6NKF7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 ARMC10P1-201ENST00000313754 855 ntBASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 AC233263.1-201ENST00000578059 224 ntBASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM88BA6NKF7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 AP004607.7-201ENST00000527152 1677 ntBASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 AP003733.4-201ENST00000623785 1697 ntBASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM88BA6NKF7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 AC012306.2-201ENST00000609350 630 ntBASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.11■■□□□ 1.61
TMEM88BA6NKF7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 RPS2P55-201ENST00000397318 883 ntBASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 AC107956.1-201ENST00000494359 873 ntBASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 PNMA6B-201ENST00000538162 1200 ntBASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 AC008175.2-201ENST00000612840 297 ntBASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 RBM17P2-201ENST00000616397 1405 ntBASIC25.1■■□□□ 1.61
TMEM88BA6NKF7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 KRT17P1-201ENST00000399211 1546 ntBASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TMEM88BA6NKF7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 TMPOP1-202ENST00000424642 1267 ntBASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 AC069544.1-201ENST00000609399 999 ntBASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM88BA6NKF7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.07■■□□□ 1.6
TMEM88BA6NKF7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM88BA6NKF7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms