Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TRAV25A0A0B4J276 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 KRT18P5-201ENST00000436075 1291 ntBASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 AC053503.5-201ENST00000601508 636 ntBASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV25A0A0B4J276 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 AP004607.4-201ENST00000530158 1459 ntBASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 FAM99A-202ENST00000538190 1989 ntBASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV25A0A0B4J276 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 EEF1DP3-203ENST00000566025 782 ntBASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV25A0A0B4J276 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 AC138907.5-202ENST00000569484 235 ntBASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV25A0A0B4J276 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV25A0A0B4J276 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC004854.2-201ENST00000608450 1441 ntBASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV25A0A0B4J276 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms