Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 AL138724.1-201ENST00000606771 1088 ntBASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms