Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV27A0A087WT01 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV27A0A087WT01 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV27A0A087WT01 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV27A0A087WT01 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV27A0A087WT01 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 AC003102.1-202ENST00000563394 1796 ntBASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 MIR4767-201ENST00000582827 78 ntBASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV27A0A087WT01 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRAV27A0A087WT01 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 UNC93B3-201ENST00000308076 687 ntBASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 AC131212.1-201ENST00000613771 668 ntBASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV27A0A087WT01 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV27A0A087WT01 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV27A0A087WT01 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.66
TRAV27A0A087WT01 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV27A0A087WT01 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV27A0A087WT01 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV27A0A087WT01 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms