Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ITGA6-203ENST00000409532 3544 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 CAGE1-206ENST00000502583 3284 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 RGL4-210ENST00000615003 3014 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 PRAMEF29P-201ENST00000418187 1139 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 LINC00486-202ENST00000424364 691 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 TRBV22-1-201ENST00000424543 337 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ATF4P3-201ENST00000433309 1056 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AL670729.1-201ENST00000436779 283 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AL035252.1-201ENST00000440642 895 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 GUSBP1-201ENST00000449061 758 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC099542.1-202ENST00000464131 1014 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 RABL3-206ENST00000483733 760 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 RPSAP4-201ENST00000488229 888 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC096713.1-201ENST00000514650 978 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AL592211.1-201ENST00000594418 497 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC022392.1-201ENST00000609403 744 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC020765.2-201ENST00000613454 432 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 LINC00680-206ENST00000635948 181 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 TAS2R1-201ENST00000382492 1359 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 RIMS2-202ENST00000339750 3780 ntTSL 3 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 BCOR-212ENST00000615339 2618 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC007216.3-201ENST00000568144 1495 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 CCIN-201ENST00000335119 1941 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 AC021016.2-201ENST00000562328 2048 ntBASIC12.13□□□□□ -0.47
LMO3Q8TAP4 MME-212ENST00000493237 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 AC131888.1-201ENST00000625028 2168 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 IDH3A-201ENST00000299518 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 EXTL3-AS1-201ENST00000501224 3691 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 SLAMF9-202ENST00000368093 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 PAX4-203ENST00000378740 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 STEAP1B-202ENST00000406890 1193 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 CHCHD2P1-201ENST00000429986 443 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 ASS1P10-201ENST00000507235 1244 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 AC008464.1-201ENST00000523050 663 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 OR52P2P-201ENST00000527287 955 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 C12orf54-203ENST00000548364 685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 ZNF766-208ENST00000600821 568 ntTSL 4 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 MIR6511B1-201ENST00000612014 85 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 AC012065.5-201ENST00000624084 510 ntBASIC12.12□□□□□ -0.47
LMO3Q8TAP4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 ZNF213-AS1-203ENST00000571963 1592 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 BCL11A-202ENST00000356842 3959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO3Q8TAP4 SLC10A6-201ENST00000273905 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 CCDC122-201ENST00000444614 2009 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 PARP6-202ENST00000287196 2625 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 PDPN-202ENST00000376057 2801 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 IGSF11-208ENST00000489689 3320 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AL645937.5-201ENST00000642091 1883 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 LINC01234-201ENST00000510694 1467 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 FGF21-201ENST00000222157 885 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 610.2 ms