Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 PCDHB12-201ENST00000239450 3853 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 C8orf44-203ENST00000519561 1835 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 TACC2-204ENST00000360561 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 FCRL6-203ENST00000368106 1306 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ARR3-205ENST00000620997 1309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AP000997.2-201ENST00000564619 8400 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 MYO7B-202ENST00000409816 6694 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 CLP1-205ENST00000533682 2435 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 LPP-AS2-201ENST00000605573 2852 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 ITIH1-211ENST00000537050 2493 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SLC25A19-201ENST00000320362 1651 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 ATP2B3-203ENST00000359149 4234 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 PEBP4-201ENST00000256404 895 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 OR52M1-201ENST00000360213 954 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DMRTC1B-203ENST00000373533 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 RCL1-203ENST00000381732 804 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 PPM1N-204ENST00000401593 548 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 HNRNPH1P1-201ENST00000403291 1185 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AKR1C5P-201ENST00000427165 609 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 RN7SL268P-201ENST00000491172 298 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AC093772.1-202ENST00000504050 645 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SNRPCP5-201ENST00000531775 189 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 C12orf54-203ENST00000548364 685 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 TMEM95-203ENST00000576060 622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SPIDR-203ENST00000517693 1848 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 LIN28A-201ENST00000254231 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AC046185.1-201ENST00000580553 2128 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 INTS14-202ENST00000420799 1741 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SLC24A3-202ENST00000613834 3694 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 FLT3-201ENST00000241453 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 MIR646HG-207ENST00000432910 2043 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AC139100.1-201ENST00000588950 2035 ntTSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 AC104852.1-201ENST00000518921 1459 ntBASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 PTPRN-204ENST00000423636 3313 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC10.55□□□□□ -0.72
NPIPA3F8WFD2 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 GBA-204ENST00000428024 1817 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 NCAM1-210ENST00000529356 1843 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 GMEB2-202ENST00000370069 4011 ntTSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 AP003393.1-201ENST00000532153 4476 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ABCB7-210ENST00000620875 2408 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 FUNDC2P1-201ENST00000327891 570 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 RNA5SP244-201ENST00000390936 112 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 HBA2-202ENST00000397806 513 ntTSL 2 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 RN7SKP73-201ENST00000411075 292 ntBASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
NPIPA3F8WFD2 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms