RNA–Protein interactions for RNA: ENST00000532153.1

AP003393.1-201, humanhuman

TSL 2 BASIC

Gene AP003393.1, Length 4,476 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003393.1-201ENST00000532153 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.12
AP003393.1-201ENST00000532153 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.94
AP003393.1-201ENST00000532153 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
AP003393.1-201ENST00000532153 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
AP003393.1-201ENST00000532153 ABCC9O60706 1549 aa18.91■□□□□ 0.62
AP003393.1-201ENST00000532153 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
AP003393.1-201ENST00000532153 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
AP003393.1-201ENST00000532153 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
AP003393.1-201ENST00000532153 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
AP003393.1-201ENST00000532153 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
AP003393.1-201ENST00000532153 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
AP003393.1-201ENST00000532153 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
AP003393.1-201ENST00000532153 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
AP003393.1-201ENST00000532153 APLP2Q06481 763 aa17.88■□□□□ 0.45
AP003393.1-201ENST00000532153 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
AP003393.1-201ENST00000532153 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AP003393.1-201ENST00000532153 UBTFP17480 764 aaKnown RBP17.81■□□□□ 0.44
AP003393.1-201ENST00000532153 NACADO15069 1562 aa17.78■□□□□ 0.44
AP003393.1-201ENST00000532153 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
AP003393.1-201ENST00000532153 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
AP003393.1-201ENST00000532153 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
AP003393.1-201ENST00000532153 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
AP003393.1-201ENST00000532153 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
AP003393.1-201ENST00000532153 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
AP003393.1-201ENST00000532153 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
AP003393.1-201ENST00000532153 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
AP003393.1-201ENST00000532153 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
AP003393.1-201ENST00000532153 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
AP003393.1-201ENST00000532153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
AP003393.1-201ENST00000532153 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
AP003393.1-201ENST00000532153 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
AP003393.1-201ENST00000532153 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
AP003393.1-201ENST00000532153 FBLN2P98095 1184 aa17.12■□□□□ 0.33
AP003393.1-201ENST00000532153 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
AP003393.1-201ENST00000532153 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
AP003393.1-201ENST00000532153 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
AP003393.1-201ENST00000532153 ITGAEP38570 1179 aa17.02■□□□□ 0.31
AP003393.1-201ENST00000532153 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
AP003393.1-201ENST00000532153 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
AP003393.1-201ENST00000532153 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
AP003393.1-201ENST00000532153 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
AP003393.1-201ENST00000532153 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
AP003393.1-201ENST00000532153 WIZO95785 1651 aa16.81■□□□□ 0.28
AP003393.1-201ENST00000532153 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
AP003393.1-201ENST00000532153 ARID3CA6NKF2 412 aa16.77■□□□□ 0.27
AP003393.1-201ENST00000532153 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
AP003393.1-201ENST00000532153 FAM50AQ14320 339 aaKnown RBP16.76■□□□□ 0.27
AP003393.1-201ENST00000532153 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
AP003393.1-201ENST00000532153 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
AP003393.1-201ENST00000532153 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
AP003393.1-201ENST00000532153 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
AP003393.1-201ENST00000532153 EEA1Q15075 1411 aa16.65■□□□□ 0.26
AP003393.1-201ENST00000532153 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
AP003393.1-201ENST00000532153 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
AP003393.1-201ENST00000532153 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
AP003393.1-201ENST00000532153 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
AP003393.1-201ENST00000532153 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
AP003393.1-201ENST00000532153 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
AP003393.1-201ENST00000532153 CLIP1P30622 1438 aa16.54■□□□□ 0.24
AP003393.1-201ENST00000532153 HRCP23327 699 aa16.54■□□□□ 0.24
AP003393.1-201ENST00000532153 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
AP003393.1-201ENST00000532153 SOGA1O94964 1423 aa16.52■□□□□ 0.24
AP003393.1-201ENST00000532153 CUX2O14529 1486 aa16.51■□□□□ 0.23
AP003393.1-201ENST00000532153 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
AP003393.1-201ENST00000532153 ZNF777Q9ULD5 760 aaPredicted RBP16.47■□□□□ 0.23
AP003393.1-201ENST00000532153 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
AP003393.1-201ENST00000532153 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
AP003393.1-201ENST00000532153 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
AP003393.1-201ENST00000532153 BICRAQ9NZM4 1560 aa16.42■□□□□ 0.22
AP003393.1-201ENST00000532153 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
AP003393.1-201ENST00000532153 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
AP003393.1-201ENST00000532153 NPM1P06748 294 aaKnown RBP eCLIP16.41■□□□□ 0.22
AP003393.1-201ENST00000532153 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
AP003393.1-201ENST00000532153 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
AP003393.1-201ENST00000532153 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
AP003393.1-201ENST00000532153 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
AP003393.1-201ENST00000532153 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
AP003393.1-201ENST00000532153 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
AP003393.1-201ENST00000532153 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
AP003393.1-201ENST00000532153 PLEKHD1A6NEE1 506 aa16.22■□□□□ 0.19
AP003393.1-201ENST00000532153 KCNH8Q96L42 1107 aa16.22■□□□□ 0.19
AP003393.1-201ENST00000532153 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
AP003393.1-201ENST00000532153 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
AP003393.1-201ENST00000532153 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
AP003393.1-201ENST00000532153 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
AP003393.1-201ENST00000532153 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
AP003393.1-201ENST00000532153 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
AP003393.1-201ENST00000532153 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
AP003393.1-201ENST00000532153 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
AP003393.1-201ENST00000532153 NESP48681 1621 aa16.16■□□□□ 0.18
AP003393.1-201ENST00000532153 CFTRP13569 1480 aa16.16■□□□□ 0.18
AP003393.1-201ENST00000532153 TSPY4P0CV99 314 aa16.15■□□□□ 0.18
AP003393.1-201ENST00000532153 TSPY10P0CW01 314 aa16.15■□□□□ 0.18
AP003393.1-201ENST00000532153 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
AP003393.1-201ENST00000532153 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
AP003393.1-201ENST00000532153 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
AP003393.1-201ENST00000532153 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
AP003393.1-201ENST00000532153 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
AP003393.1-201ENST00000532153 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
AP003393.1-201ENST00000532153 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms