Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC104187.1-201ENST00000607510 612 ntBASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TNFRSF11AQ9Y6Q6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 KRT87P-202ENST00000534226 1464 ntBASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AL034346.1-201ENST00000568244 1277 ntBASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.25■■□□□ 1.79
TNFRSF11AQ9Y6Q6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
TNFRSF11AQ9Y6Q6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC006015.1-201ENST00000429970 570 ntBASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 AC004911.1-201ENST00000416316 871 ntBASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
TNFRSF11AQ9Y6Q6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.21■■□□□ 1.79
TNFRSF11AQ9Y6Q6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms