Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA9Q9Y5H5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA9Q9Y5H5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA9Q9Y5H5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 AC106739.1-201ENST00000617035 715 ntBASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 AC110285.6-201ENST00000617652 491 ntBASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA9Q9Y5H5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 AC233992.3-201ENST00000607491 485 ntBASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHA9Q9Y5H5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 OXCT2P1-201ENST00000447263 1535 ntBASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
PCDHA9Q9Y5H5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHA9Q9Y5H5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHA9Q9Y5H5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHA9Q9Y5H5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms