Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AP4S1Q9Y587 C17orf82-201ENST00000623772 1530 ntBASIC20.12■□□□□ 0.81
AP4S1Q9Y587 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4S1Q9Y587 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP4S1Q9Y587 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 U85056.1-201ENST00000616429 682 ntBASIC20.1■□□□□ 0.81
AP4S1Q9Y587 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 AL049796.1-201ENST00000565336 1766 ntBASIC20.1■□□□□ 0.81
AP4S1Q9Y587 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4S1Q9Y587 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 AC005703.6-201ENST00000623265 1329 ntBASIC20.09■□□□□ 0.81
AP4S1Q9Y587 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4S1Q9Y587 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.08■□□□□ 0.81
AP4S1Q9Y587 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4S1Q9Y587 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms