Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 TERF1P2-201ENST00000583350 1212 ntBASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.46■■□□□ 1.51
PCDHA4Q9UN74 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHA4Q9UN74 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHA4Q9UN74 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHA4Q9UN74 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA4Q9UN74 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 AC097381.1-201ENST00000429019 1296 ntBASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 CCDC92B-201ENST00000575506 885 ntBASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 MIR6821-201ENST00000617625 74 ntBASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 FBXW4P1-201ENST00000426721 2239 ntBASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHA4Q9UN74 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDHA4Q9UN74 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA4Q9UN74 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 AC026271.2-201ENST00000428091 497 ntBASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 KRT18P14-201ENST00000534205 1250 ntBASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA4Q9UN74 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 RARRES2P6-201ENST00000567333 442 ntBASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA4Q9UN74 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDHA4Q9UN74 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHA4Q9UN74 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA4Q9UN74 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms