Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 AL162430.1-201ENST00000480705 870 ntBASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.73■□□□□ 0.43
RPUSD1Q9UJJ7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
RPUSD1Q9UJJ7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPUSD1Q9UJJ7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RPUSD1Q9UJJ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 AC079140.4-201ENST00000507448 529 ntBASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 FAM99A-202ENST00000538190 1989 ntBASIC17.7■□□□□ 0.42
RPUSD1Q9UJJ7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 AC055733.4-201ENST00000638462 1354 ntBASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPUSD1Q9UJJ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms