Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRFN1Q9P244 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
LRFN1Q9P244 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.57■□□□□ 0.72
LRFN1Q9P244 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.57■□□□□ 0.72
LRFN1Q9P244 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 UBE2DNL-204ENST00000602536 740 ntBASIC19.57■□□□□ 0.72
LRFN1Q9P244 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.57■□□□□ 0.72
LRFN1Q9P244 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRFN1Q9P244 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.57■□□□□ 0.72
LRFN1Q9P244 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 AC138907.5-202ENST00000569484 235 ntBASIC19.56■□□□□ 0.72
LRFN1Q9P244 MFSD11-216ENST00000590393 1141 ntBASIC19.56■□□□□ 0.72
LRFN1Q9P244 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN1Q9P244 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN1Q9P244 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 AC006970.2-201ENST00000450065 779 ntBASIC19.55■□□□□ 0.72
LRFN1Q9P244 AC010141.2-201ENST00000452426 721 ntBASIC19.55■□□□□ 0.72
LRFN1Q9P244 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.55■□□□□ 0.72
LRFN1Q9P244 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LRFN1Q9P244 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN1Q9P244 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 HLA-L-209ENST00000420110 1011 ntBASIC19.54■□□□□ 0.72
LRFN1Q9P244 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN1Q9P244 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.54■□□□□ 0.72
LRFN1Q9P244 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRFN1Q9P244 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN1Q9P244 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRFN1Q9P244 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.53■□□□□ 0.72
LRFN1Q9P244 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN1Q9P244 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRFN1Q9P244 KRT18P20-201ENST00000548986 1279 ntBASIC19.53■□□□□ 0.72
LRFN1Q9P244 EEF1DP3-203ENST00000566025 782 ntBASIC19.53■□□□□ 0.72
LRFN1Q9P244 AC053503.5-201ENST00000601508 636 ntBASIC19.53■□□□□ 0.72
LRFN1Q9P244 MYCNOS-205ENST00000641950 531 ntBASIC19.53■□□□□ 0.72
LRFN1Q9P244 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN1Q9P244 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 C9orf163-202ENST00000624034 2573 ntBASIC19.52■□□□□ 0.72
LRFN1Q9P244 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN1Q9P244 C1orf229-201ENST00000623686 2258 ntBASIC19.52■□□□□ 0.72
LRFN1Q9P244 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN1Q9P244 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms