Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GAR1Q9NY12 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAR1Q9NY12 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GAR1Q9NY12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
GAR1Q9NY12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.2■□□□□ 0.34
GAR1Q9NY12 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GAR1Q9NY12 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.2■□□□□ 0.34
GAR1Q9NY12 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
GAR1Q9NY12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAR1Q9NY12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GAR1Q9NY12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAR1Q9NY12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GAR1Q9NY12 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAR1Q9NY12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GAR1Q9NY12 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GAR1Q9NY12 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.18■□□□□ 0.34
GAR1Q9NY12 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.18■□□□□ 0.34
GAR1Q9NY12 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.18■□□□□ 0.34
GAR1Q9NY12 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.18■□□□□ 0.34
GAR1Q9NY12 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 AC092171.4-201ENST00000609130 632 ntBASIC17.18■□□□□ 0.34
GAR1Q9NY12 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GAR1Q9NY12 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAR1Q9NY12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
GAR1Q9NY12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 AC138932.1-201ENST00000534164 6830 ntBASIC17.17■□□□□ 0.34
GAR1Q9NY12 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GAR1Q9NY12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GAR1Q9NY12 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.17■□□□□ 0.34
GAR1Q9NY12 AC110285.6-201ENST00000617652 491 ntBASIC17.17■□□□□ 0.34
GAR1Q9NY12 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAR1Q9NY12 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.16■□□□□ 0.34
GAR1Q9NY12 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GAR1Q9NY12 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAR1Q9NY12 LINC01521-201ENST00000504184 1943 ntBASIC17.16■□□□□ 0.34
GAR1Q9NY12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.16■□□□□ 0.34
GAR1Q9NY12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms