Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NSMCE4AQ9NXX6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.31■■□□□ 1
NSMCE4AQ9NXX6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.3■■□□□ 1
NSMCE4AQ9NXX6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.29■■□□□ 1
NSMCE4AQ9NXX6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NSMCE4AQ9NXX6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 BX842568.3-201ENST00000418104 571 ntBASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NSMCE4AQ9NXX6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
NSMCE4AQ9NXX6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 AC003102.1-202ENST00000563394 1796 ntBASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
NSMCE4AQ9NXX6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 AL136116.3-201ENST00000402907 1138 ntBASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NSMCE4AQ9NXX6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms