Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDE1Q9NXR1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 AC074183.2-201ENST00000623112 922 ntBASIC20.59■□□□□ 0.89
NDE1Q9NXR1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDE1Q9NXR1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 KRT18P60-201ENST00000312876 1297 ntBASIC20.58■□□□□ 0.89
NDE1Q9NXR1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.58■□□□□ 0.89
NDE1Q9NXR1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NDE1Q9NXR1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
NDE1Q9NXR1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDE1Q9NXR1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NDE1Q9NXR1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NDE1Q9NXR1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.56■□□□□ 0.88
NDE1Q9NXR1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.55■□□□□ 0.88
NDE1Q9NXR1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 BHLHE23-202ENST00000612929 1109 ntBASIC20.55■□□□□ 0.88
NDE1Q9NXR1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
NDE1Q9NXR1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDE1Q9NXR1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDE1Q9NXR1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms