Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.03■□□□□ 0.64
PARPBPQ9NWS1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.02■□□□□ 0.64
PARPBPQ9NWS1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PARPBPQ9NWS1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PARPBPQ9NWS1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PARPBPQ9NWS1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PARPBPQ9NWS1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 AC005224.4-201ENST00000583262 1652 ntBASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 MIR935-201ENST00000401179 91 ntBASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.01■□□□□ 0.63
PARPBPQ9NWS1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 FXN-202ENST00000396364 980 ntTSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 RARRES2P6-201ENST00000567333 442 ntBASIC19■□□□□ 0.63
PARPBPQ9NWS1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19■□□□□ 0.63
PARPBPQ9NWS1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19■□□□□ 0.63
PARPBPQ9NWS1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.99■□□□□ 0.63
PARPBPQ9NWS1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.98■□□□□ 0.63
PARPBPQ9NWS1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms