Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS2Q9NRF8 AC244015.2-201ENST00000616358 1861 ntBASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 AC106739.1-201ENST00000617035 715 ntBASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTPS2Q9NRF8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 OR7E47P-201ENST00000546390 1422 ntBASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTPS2Q9NRF8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 AF106564.1-201ENST00000607058 2553 ntBASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 AC068587.7-201ENST00000641602 218 ntBASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTPS2Q9NRF8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTPS2Q9NRF8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CTPS2Q9NRF8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTPS2Q9NRF8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 BX842568.3-201ENST00000418104 571 ntBASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 Z98882.1-201ENST00000622160 2253 ntBASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTPS2Q9NRF8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTPS2Q9NRF8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms