Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.25■□□□□ 0.67
HINT3Q9NQE9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.25■□□□□ 0.67
HINT3Q9NQE9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
HINT3Q9NQE9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
HINT3Q9NQE9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HINT3Q9NQE9 AC073130.3-201ENST00000624389 2278 ntBASIC19.25■□□□□ 0.67
HINT3Q9NQE9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 AC092171.4-201ENST00000609130 632 ntBASIC19.24■□□□□ 0.67
HINT3Q9NQE9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HINT3Q9NQE9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HINT3Q9NQE9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 AC096631.2-201ENST00000436136 790 ntBASIC19.22■□□□□ 0.67
HINT3Q9NQE9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 AC099791.2-201ENST00000605725 427 ntBASIC19.22■□□□□ 0.67
HINT3Q9NQE9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HINT3Q9NQE9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HINT3Q9NQE9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.21■□□□□ 0.67
HINT3Q9NQE9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.21■□□□□ 0.67
HINT3Q9NQE9 DUX4L19-201ENST00000557448 1267 ntBASIC19.21■□□□□ 0.67
HINT3Q9NQE9 AL139246.5-201ENST00000606645 996 ntBASIC19.21■□□□□ 0.67
HINT3Q9NQE9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HINT3Q9NQE9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HINT3Q9NQE9 AL157384.1-201ENST00000445995 2473 ntBASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 AC068587.7-201ENST00000641602 218 ntBASIC19.2■□□□□ 0.66
HINT3Q9NQE9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HINT3Q9NQE9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms