Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GCM1Q9NP62 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.18■□□□□ 0.5
GCM1Q9NP62 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GCM1Q9NP62 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GCM1Q9NP62 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 AC079834.2-201ENST00000609776 1949 ntBASIC18.16■□□□□ 0.5
GCM1Q9NP62 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 AC087623.3-201ENST00000607047 1098 ntBASIC18.16■□□□□ 0.5
GCM1Q9NP62 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GCM1Q9NP62 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GCM1Q9NP62 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.15■□□□□ 0.5
GCM1Q9NP62 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GCM1Q9NP62 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.14■□□□□ 0.5
GCM1Q9NP62 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GCM1Q9NP62 AC092053.2-201ENST00000640557 1818 ntBASIC18.14■□□□□ 0.5
GCM1Q9NP62 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 CCDC92B-201ENST00000575506 885 ntBASIC18.14■□□□□ 0.49
GCM1Q9NP62 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 TERF1P2-201ENST00000583350 1212 ntBASIC18.14■□□□□ 0.49
GCM1Q9NP62 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 AC005224.4-201ENST00000583262 1652 ntBASIC18.14■□□□□ 0.49
GCM1Q9NP62 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GCM1Q9NP62 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms