Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNDIG1Q9H7V2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNDIG1Q9H7V2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 NCF1B-203ENST00000435988 1254 ntBASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNDIG1Q9H7V2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 AP004607.7-201ENST00000527152 1677 ntBASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 AP001160.3-201ENST00000601484 763 ntBASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNDIG1Q9H7V2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 AC007322.1-201ENST00000426983 750 ntBASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SYNDIG1Q9H7V2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 AC092068.2-201ENST00000590491 1708 ntBASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 AC079089.2-201ENST00000531211 1277 ntBASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 AC005181.1-201ENST00000604782 1256 ntBASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNDIG1Q9H7V2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 AL121832.2-201ENST00000610979 668 ntBASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 AC231657.2-201ENST00000624556 255 ntBASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 MYCNOS-205ENST00000641950 531 ntBASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYNDIG1Q9H7V2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.74■□□□□ 0.91
SYNDIG1Q9H7V2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms