Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.92■■□□□ 1.9
CHMP4BQ9H444 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 CLDN5-201ENST00000403084 2357 ntBASIC26.91■■□□□ 1.9
CHMP4BQ9H444 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CHMP4BQ9H444 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 BX005040.4-201ENST00000637145 1518 ntBASIC26.9■■□□□ 1.9
CHMP4BQ9H444 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.9■■□□□ 1.9
CHMP4BQ9H444 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHMP4BQ9H444 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHMP4BQ9H444 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CHMP4BQ9H444 AC142381.2-201ENST00000566120 298 ntBASIC26.89■■□□□ 1.9
CHMP4BQ9H444 AC003102.1-202ENST00000563394 1796 ntBASIC26.89■■□□□ 1.89
CHMP4BQ9H444 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHMP4BQ9H444 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHMP4BQ9H444 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 AL354811.1-201ENST00000610286 706 ntBASIC26.86■■□□□ 1.89
CHMP4BQ9H444 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHMP4BQ9H444 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 AC012414.1-201ENST00000556676 535 ntBASIC26.85■■□□□ 1.89
CHMP4BQ9H444 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHMP4BQ9H444 Z98882.1-201ENST00000622160 2253 ntBASIC26.85■■□□□ 1.89
CHMP4BQ9H444 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 AC005837.3-201ENST00000612163 286 ntBASIC26.84■■□□□ 1.89
CHMP4BQ9H444 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms