Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
POLR2J2Q9GZM3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 AC073130.3-201ENST00000624389 2278 ntBASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2J2Q9GZM3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR2J2Q9GZM3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR2J2Q9GZM3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
POLR2J2Q9GZM3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
POLR2J2Q9GZM3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 AL356441.2-201ENST00000443009 864 ntBASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2J2Q9GZM3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 Z98882.1-201ENST00000622160 2253 ntBASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2J2Q9GZM3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
POLR2J2Q9GZM3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 AC010525.1-201ENST00000585559 441 ntBASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J2Q9GZM3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
POLR2J2Q9GZM3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms