Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 AC066615.1-201ENST00000640911 628 ntBASIC20.35■□□□□ 0.85
STRADBQ9C0K7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
STRADBQ9C0K7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 MIR4651-201ENST00000582622 73 ntBASIC20.34■□□□□ 0.85
STRADBQ9C0K7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
STRADBQ9C0K7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 MIPEPP3-201ENST00000412105 444 ntBASIC20.33■□□□□ 0.85
STRADBQ9C0K7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
STRADBQ9C0K7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
STRADBQ9C0K7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.33■□□□□ 0.84
STRADBQ9C0K7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
STRADBQ9C0K7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.33■□□□□ 0.84
STRADBQ9C0K7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.32■□□□□ 0.84
STRADBQ9C0K7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
STRADBQ9C0K7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.31■□□□□ 0.84
STRADBQ9C0K7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 AC098934.4-201ENST00000564127 592 ntBASIC20.31■□□□□ 0.84
STRADBQ9C0K7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
STRADBQ9C0K7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 AL512625.2-201ENST00000417533 625 ntBASIC20.3■□□□□ 0.84
STRADBQ9C0K7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.3■□□□□ 0.84
STRADBQ9C0K7 RNA5SP413-201ENST00000516373 109 ntBASIC20.3■□□□□ 0.84
STRADBQ9C0K7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
STRADBQ9C0K7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
STRADBQ9C0K7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms