Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 AC144652.1-201ENST00000609974 1624 ntBASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 Z98882.1-201ENST00000622160 2253 ntBASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 HES4-204ENST00000484667 667 ntTSL 3 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LCE3DQ9BYE3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MIR3648-2-201ENST00000581792 180 ntBASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AC018755.3-202ENST00000596210 929 ntBASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 MIR3648-1-201ENST00000615959 180 ntBASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 AC022413.1-201ENST00000624602 984 ntBASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 FEM1AP4-201ENST00000443167 1987 ntBASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LCE3DQ9BYE3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms