Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
CGREF1Q99674 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.23■□□□□ 0.83
CGREF1Q99674 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 RARRES2P1-201ENST00000474487 481 ntBASIC20.23■□□□□ 0.83
CGREF1Q99674 UNC93B8-201ENST00000511903 705 ntBASIC20.23■□□□□ 0.83
CGREF1Q99674 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.23■□□□□ 0.83
CGREF1Q99674 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.23■□□□□ 0.83
CGREF1Q99674 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.23■□□□□ 0.83
CGREF1Q99674 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CGREF1Q99674 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CGREF1Q99674 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.22■□□□□ 0.83
CGREF1Q99674 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.22■□□□□ 0.83
CGREF1Q99674 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.22■□□□□ 0.83
CGREF1Q99674 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.22■□□□□ 0.83
CGREF1Q99674 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CGREF1Q99674 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
CGREF1Q99674 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CGREF1Q99674 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.21■□□□□ 0.83
CGREF1Q99674 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.21■□□□□ 0.83
CGREF1Q99674 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CGREF1Q99674 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.21■□□□□ 0.83
CGREF1Q99674 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.21■□□□□ 0.83
CGREF1Q99674 AC099791.2-201ENST00000605725 427 ntBASIC20.21■□□□□ 0.83
CGREF1Q99674 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.21■□□□□ 0.83
CGREF1Q99674 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CGREF1Q99674 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CGREF1Q99674 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
CGREF1Q99674 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CGREF1Q99674 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CGREF1Q99674 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CGREF1Q99674 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 OR2I1P-207ENST00000453522 948 ntBASIC20.2■□□□□ 0.82
CGREF1Q99674 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.2■□□□□ 0.82
CGREF1Q99674 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
CGREF1Q99674 OXCT2P1-201ENST00000447263 1535 ntBASIC20.2■□□□□ 0.82
CGREF1Q99674 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CGREF1Q99674 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.2■□□□□ 0.82
CGREF1Q99674 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
CGREF1Q99674 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CGREF1Q99674 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.19■□□□□ 0.82
CGREF1Q99674 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.19■□□□□ 0.82
CGREF1Q99674 AC087239.1-201ENST00000622671 572 ntBASIC20.19■□□□□ 0.82
CGREF1Q99674 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CGREF1Q99674 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CGREF1Q99674 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CGREF1Q99674 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms