Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
NEK1Q96PY6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 AC104564.3-201ENST00000582367 638 ntBASIC25.3■■□□□ 1.64
NEK1Q96PY6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.3■■□□□ 1.64
NEK1Q96PY6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 BX005040.4-201ENST00000637145 1518 ntBASIC25.29■■□□□ 1.64
NEK1Q96PY6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NEK1Q96PY6 AC009237.3-201ENST00000393279 1427 ntBASIC25.29■■□□□ 1.64
NEK1Q96PY6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.29■■□□□ 1.64
NEK1Q96PY6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NEK1Q96PY6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.28■■□□□ 1.64
NEK1Q96PY6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NEK1Q96PY6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.28■■□□□ 1.64
NEK1Q96PY6 AC012414.1-201ENST00000556676 535 ntBASIC25.28■■□□□ 1.64
NEK1Q96PY6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NEK1Q96PY6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NEK1Q96PY6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NEK1Q96PY6 AC105265.2-201ENST00000467189 838 ntBASIC25.27■■□□□ 1.64
NEK1Q96PY6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NEK1Q96PY6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NEK1Q96PY6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.27■■□□□ 1.64
NEK1Q96PY6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 AC026310.3-201ENST00000625186 2373 ntBASIC25.26■■□□□ 1.63
NEK1Q96PY6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NEK1Q96PY6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.26■■□□□ 1.63
NEK1Q96PY6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
NEK1Q96PY6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.25■■□□□ 1.63
NEK1Q96PY6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.25■■□□□ 1.63
NEK1Q96PY6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.25■■□□□ 1.63
NEK1Q96PY6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
NEK1Q96PY6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
NEK1Q96PY6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NEK1Q96PY6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NEK1Q96PY6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NEK1Q96PY6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.24■■□□□ 1.63
NEK1Q96PY6 AC055733.4-201ENST00000638462 1354 ntBASIC25.24■■□□□ 1.63
NEK1Q96PY6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NEK1Q96PY6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
NEK1Q96PY6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.24■■□□□ 1.63
NEK1Q96PY6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NEK1Q96PY6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.23■■□□□ 1.63
NEK1Q96PY6 AC005224.4-201ENST00000583262 1652 ntBASIC25.23■■□□□ 1.63
NEK1Q96PY6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NEK1Q96PY6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NEK1Q96PY6 Z98882.1-201ENST00000622160 2253 ntBASIC25.23■■□□□ 1.63
NEK1Q96PY6 IRS3P-201ENST00000223076 1006 ntBASIC25.23■■□□□ 1.63
NEK1Q96PY6 AL354811.1-201ENST00000610286 706 ntBASIC25.23■■□□□ 1.63
NEK1Q96PY6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NEK1Q96PY6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.23■■□□□ 1.63
NEK1Q96PY6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.23■■□□□ 1.63
NEK1Q96PY6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NEK1Q96PY6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
NEK1Q96PY6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NEK1Q96PY6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
NEK1Q96PY6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
NEK1Q96PY6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NEK1Q96PY6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.21■■□□□ 1.63
NEK1Q96PY6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms