Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXN4Q96NZ1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 MIR939-201ENST00000401314 82 ntBASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 AC105265.2-201ENST00000467189 838 ntBASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 AP001330.3-201ENST00000520123 633 ntBASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN4Q96NZ1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN4Q96NZ1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 RARRES2P6-201ENST00000567333 442 ntBASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 AC068587.7-201ENST00000641602 218 ntBASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
FOXN4Q96NZ1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN4Q96NZ1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 AC091305.1-201ENST00000479476 895 ntBASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN4Q96NZ1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 AC005229.4-201ENST00000610085 2198 ntBASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FOXN4Q96NZ1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 AC008764.7-201ENST00000593779 1081 ntBASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXN4Q96NZ1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 AC026271.2-201ENST00000428091 497 ntBASIC19.03■□□□□ 0.64
FOXN4Q96NZ1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms