Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.81■■□□□ 1.08
RTP4Q96DX8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RTP4Q96DX8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.81■■□□□ 1.08
RTP4Q96DX8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.81■■□□□ 1.08
RTP4Q96DX8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTP4Q96DX8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTP4Q96DX8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.8■■□□□ 1.08
RTP4Q96DX8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.79■■□□□ 1.08
RTP4Q96DX8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 IGHV3-19-201ENST00000521488 291 ntBASIC21.79■■□□□ 1.08
RTP4Q96DX8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.79■■□□□ 1.08
RTP4Q96DX8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTP4Q96DX8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RTP4Q96DX8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.79■■□□□ 1.08
RTP4Q96DX8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTP4Q96DX8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
RTP4Q96DX8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTP4Q96DX8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTP4Q96DX8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.77■■□□□ 1.08
RTP4Q96DX8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RTP4Q96DX8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTP4Q96DX8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
RTP4Q96DX8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.77■■□□□ 1.08
RTP4Q96DX8 RARRES2P6-201ENST00000567333 442 ntBASIC21.77■■□□□ 1.08
RTP4Q96DX8 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.77■■□□□ 1.08
RTP4Q96DX8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTP4Q96DX8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.77■■□□□ 1.08
RTP4Q96DX8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 AL024507.2-201ENST00000606070 2574 ntBASIC21.76■■□□□ 1.07
RTP4Q96DX8 AF106564.1-201ENST00000607058 2553 ntBASIC21.76■■□□□ 1.07
RTP4Q96DX8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 AL136967.2-201ENST00000623968 743 ntBASIC21.76■■□□□ 1.07
RTP4Q96DX8 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTP4Q96DX8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.76■■□□□ 1.07
RTP4Q96DX8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.75■■□□□ 1.07
RTP4Q96DX8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.75■■□□□ 1.07
RTP4Q96DX8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.75■■□□□ 1.07
RTP4Q96DX8 AF213884.3-201ENST00000563833 479 ntBASIC21.75■■□□□ 1.07
RTP4Q96DX8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.75■■□□□ 1.07
RTP4Q96DX8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms