Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB1Q8WWH5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 TSPY13P-201ENST00000338964 914 ntBASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB1Q8WWH5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 AC104564.3-201ENST00000582367 638 ntBASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB1Q8WWH5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 AC009102.2-201ENST00000606772 1639 ntBASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB1Q8WWH5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB1Q8WWH5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 AC103834.1-201ENST00000520383 144 ntBASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 AC103724.3-201ENST00000564481 992 ntBASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 AL499627.2-201ENST00000606283 725 ntBASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRUB1Q8WWH5 AC021242.3-201ENST00000607598 1377 ntBASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms