Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
SCFD1Q8WVM8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 AC055733.4-201ENST00000638462 1354 ntBASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.51■■□□□ 1.35
SCFD1Q8WVM8 AC009237.3-201ENST00000393279 1427 ntBASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 AC026310.3-201ENST00000625186 2373 ntBASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCFD1Q8WVM8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 AC005224.4-201ENST00000583262 1652 ntBASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 IRS3P-201ENST00000223076 1006 ntBASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 AL354811.1-201ENST00000610286 706 ntBASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.49■■□□□ 1.35
SCFD1Q8WVM8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 AL358852.1-201ENST00000623174 1268 ntBASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCFD1Q8WVM8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 AC104564.3-201ENST00000582367 638 ntBASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 MIR6084-201ENST00000622012 110 ntBASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCFD1Q8WVM8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 TPRG1LP1-201ENST00000598702 760 ntBASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
SCFD1Q8WVM8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
SCFD1Q8WVM8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SCFD1Q8WVM8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SCFD1Q8WVM8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SCFD1Q8WVM8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.45■■□□□ 1.34
SCFD1Q8WVM8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.45■■□□□ 1.34
SCFD1Q8WVM8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms